Insertion junction: LMJ.RY0402.076855_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.076855
Chromosome:chromosome 8
Location:4865002
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g384750 AMYA3,AMA3 Alpha-amylase 3; (1 of 3) K01176 - alpha-amylase (E3.2.1.1, amyA, malS) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATAGGTGTGTCGCTGGCACCCTAATCGAG
Internal bar code:GTCGTCGACAGCGCCCGAGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:774
LEAP-Seq percent confirming:98.0028
LEAP-Seq n confirming:4858
LEAP-Seq n nonconfirming:99
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGAAGTGAGTGGGGCTGA
Suggested primer 2:CCACCAATCTCTCCAGTGGT