Insertion junction: LMJ.RY0402.076946_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.076946
Chromosome:chromosome 3
Location:2172220
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g157400 (1 of 1) IPR000595//IPR014710//IPR018490 - Cyclic nucleotide-binding domain // RmlC-like jelly roll fold // Cyclic nucleotide-binding-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATCGGGCTCGGGTATGTAACCCCACGC
Internal bar code:TATGCTTGAAGACCCCTTCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1208
LEAP-Seq percent confirming:99.7387
LEAP-Seq n confirming:1145
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTTGTGACGCGTTTGTGT
Suggested primer 2:TAGGAGGTTGTGCGAGTGGT