Insertion junction: LMJ.RY0402.077086_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.077086
Chromosome:chromosome 9
Location:5281257
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g399738 (1 of 239) IPR016024 - Armadillo-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTGGATTAGCCGGTGGCCCACCCGCGG
Internal bar code:GCATTACAACATGATGTTCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:189
LEAP-Seq percent confirming:92.7906
LEAP-Seq n confirming:5972
LEAP-Seq n nonconfirming:464
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CATCTGGCCCGTTTAGTGTT
Suggested primer 2:CACATACACACATCCTCGGC