Insertion junction: LMJ.RY0402.077114_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.077114
Chromosome:chromosome 16
Location:4753960
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g686700 (1 of 10) PTHR31867//PTHR31867:SF1 - FAMILY NOT NAMED // EXPANSIN-A1-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAGAGGACGAAGCGCTGTAGTGTAGCAC
Internal bar code:ACCGTGTACCGTCATTGATAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:698
LEAP-Seq percent confirming:99.2276
LEAP-Seq n confirming:6295
LEAP-Seq n nonconfirming:49
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTCATTGCCGTAGTAGGT
Suggested primer 2:GCTTGACCTTCCTCTTGTGC