Insertion junction: LMJ.RY0402.077280_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.077280
Chromosome:chromosome 7
Location:3644394
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g337100 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGTAGAGGAGCTAGGATGGGAGTCAGAG
Internal bar code:CACCAGTGGGCGCCAGGCTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:656
LEAP-Seq percent confirming:97.822
LEAP-Seq n confirming:1572
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCGGTGAGTTCCTGATGT
Suggested primer 2:GAACAAGCTTCGCAAAGGAC