Insertion junction: LMJ.RY0402.077351_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.077351
Chromosome:chromosome 1
Location:4941590
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g034150 (1 of 1) PTHR10110//PTHR10110:SF86 - SODIUM/HYDROGEN EXCHANGER // SODIUM/HYDROGEN EXCHANGER 7-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATGCCAACAACCCGACACGCACGTGCTT
Internal bar code:TTAGCGTGTGTTCAGGTTAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:154
LEAP-Seq percent confirming:70.7483
LEAP-Seq n confirming:208
LEAP-Seq n nonconfirming:86
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGCACTCCGCTAAAAGG
Suggested primer 2:CTTCTTCGAGGGTGATCTGG