Insertion junction: LMJ.RY0402.077377_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.077377
Chromosome:chromosome 1
Location:801191
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g004124 (1 of 3) 3.2.1.8 - Endo-1,4-beta-xylanase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCATGTGTGCAGGTATGCTCGCCCCAGGG
Internal bar code:TTGGCCATGCGCGCTAGCGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:599
LEAP-Seq percent confirming:52.9138
LEAP-Seq n confirming:20838
LEAP-Seq n nonconfirming:18543
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTGCCATTCAAAGCAACA
Suggested primer 2:ACGTAGGGCTTTGAACATGG