Insertion junction: LMJ.RY0402.077448_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.077448
Chromosome:chromosome 5
Location:1419182
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g244200 TMA1,COTH2 spore coat protein H; (1 of 3) PF08757 - CotH protein (CotH) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAGCGGCCGTGGAACGCACCCCGCCGTA
Internal bar code:TTCTGGTCTAATCCGAGGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:41
LEAP-Seq percent confirming:43.75
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:63
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCTTGAGTAGCTGCCCT
Suggested primer 2:ACCCTCTTCCCAACCAGTTT