Insertion junction: LMJ.RY0402.077542_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.077542
Chromosome:chromosome 9
Location:1240491
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g399550 (1 of 1) PTHR10857//PTHR10857:SF11 - COPINE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATCACTCATTCACTGCTCGCACCTTCG
Internal bar code:GCCACCAATGAGCCTCGGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:19
LEAP-Seq percent confirming:85.5648
LEAP-Seq n confirming:1227
LEAP-Seq n nonconfirming:207
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGATGGGGGTTACATCC
Suggested primer 2:CTCGGAGCAGTCTCGTTACC