Insertion junction: LMJ.RY0402.077542_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.077542
Chromosome:chromosome 9
Location:1240577
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g399550 (1 of 1) PTHR10857//PTHR10857:SF11 - COPINE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCGCATCTGCGCAGTCGCGCCGCCCAC
Internal bar code:ACCTGCCATCCCTTCGACGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:446
LEAP-Seq percent confirming:99.8152
LEAP-Seq n confirming:3240
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGATGGGGGTTACATCC
Suggested primer 2:CTCGGAGCAGTCTCGTTACC