Insertion junction: LMJ.RY0402.077644_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.077644
Chromosome:chromosome 6
Location:2708989
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g270500 (1 of 1) PF00759//PF03067 - Glycosyl hydrolase family 9 (Glyco_hydro_9) // Chitin binding domain (Chitin_bind_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATTGCCAAGGTCAAAGGGCTTCAGCTAC
Internal bar code:CTGACGACGGGGAGTCGTTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:725
LEAP-Seq percent confirming:98.2206
LEAP-Seq n confirming:3864
LEAP-Seq n nonconfirming:70
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ACGACTAGAACGGACATGGG
Suggested primer 2:ACTTCTTCTGTGGGTGTGGG