Insertion junction: LMJ.RY0402.077713_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.077713
Chromosome:chromosome 4
Location:1183750
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g215600 (1 of 1) PTHR32183:SF6 - THIOCYANATE METHYLTRANSFERASE 1-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAACAGTGTGGGTGAAGTATGTGTGTGGG
Internal bar code:GTTTTTATTTTACATTGATCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:982
LEAP-Seq percent confirming:99.623
LEAP-Seq n confirming:10833
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGGTCGCTAACCAGACA
Suggested primer 2:TCACGCACATTCTTCTTTGC