Insertion junction: LMJ.RY0402.077924_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.077924
Chromosome:chromosome 5
Location:1420481
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g244200 TMA1,COTH2 spore coat protein H; (1 of 3) PF08757 - CotH protein (CotH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCAAGGTACGGGAGCATGCATGGTGGTA
Internal bar code:GAACGTGGTAATGCCGTACGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:630
LEAP-Seq percent confirming:94.5645
LEAP-Seq n confirming:1444
LEAP-Seq n nonconfirming:83
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTATGTCTAGCAGGCGGGAG
Suggested primer 2:AGGGCAGCTACTCAAGGACA