Insertion junction: LMJ.RY0402.078027_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.078027
Chromosome:chromosome 16
Location:5947332
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g677001 (1 of 1) PTHR31596:SF1 - T-CELL ACTIVATION INHIBITOR, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTCTCATTGTGACTGCGCCGTCATAGG
Internal bar code:GGCCCTAGTTGGGGTCACACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:494
LEAP-Seq percent confirming:98.0136
LEAP-Seq n confirming:1727
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGGAGTGACCATGTGATG
Suggested primer 2:GCTCTTACAGGGGGAAGGAC