Insertion junction: LMJ.RY0402.078096_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.078096
Chromosome:chromosome 1
Location:1572242
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g008150 RPK1 RNA-polymerase-subunit kinase; (1 of 1) IPR000719//IPR001932//IPR002290//IPR011009 - Protein kinase domain // PPM-type phosphatase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCCACCACCGTCACCAGCCGCCTCCGC
Internal bar code:CAAGAAAGTGTTATCGCGGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:114
LEAP-Seq percent confirming:86.9852
LEAP-Seq n confirming:3295
LEAP-Seq n nonconfirming:493
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TTACAGCATCAAGGTCTGCG
Suggested primer 2:TCCATGGAGGACGGAGTTAC