Insertion junction: LMJ.RY0402.078105_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.078105
Chromosome:chromosome 11
Location:567471
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g467608 (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAACACACGCCGACCTGCTCCCCCTCCCC
Internal bar code:GATTGCCCATTCGGCACTCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:33
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTACCTGTGCCTCAACTC
Suggested primer 2:TGTCATACACACACGCCCTT