Insertion junction: LMJ.RY0402.078140_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.078140
Chromosome:chromosome 3
Location:1519110
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g152100 XRN2 5' to 3' exoribonuclease; (1 of 1) IPR004859//IPR027073//IPR029060 - Putative 5-3 exonuclease // 5'-3' exoribonuclease // PIN domain-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGTCGCAACATAAGCACGAATTCAGCTA
Internal bar code:GGGGCGAGGTGGTAGCAAAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:586
LEAP-Seq percent confirming:99.209
LEAP-Seq n confirming:878
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTTCTTGGCCTTCTTCTT
Suggested primer 2:AAACATGGCAGGTGGAGTTC