Insertion junction: LMJ.RY0402.078148_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.078148
Chromosome:chromosome 5
Location:1956503
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g241636 (1 of 1) PTHR23042:SF72 - TRANSCRIPTION FACTOR BHLH104-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTTATGAAACATATGGCTTCATACTCAC
Internal bar code:AATATGGAAGGTGTCCATTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:577
LEAP-Seq percent confirming:99.3872
LEAP-Seq n confirming:1784
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGCGTCACTCAAGTTGT
Suggested primer 2:TATTCCCCGTCTCTGTTTGC