Insertion junction: LMJ.RY0402.078175_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.078175
Chromosome:chromosome 8
Location:1216286
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre08.g363250 (1 of 3) IPR000104//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, cysteine-containing subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGAAGCTGGTGGTCTGCACTCGGGGGCA
Internal bar code:TCCGTATAAATAGATCGCTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:503
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCGGAATGTGAGAGCAG
Suggested primer 2:ATTCTCAGGAGGACTCAGCG