Insertion junction: LMJ.RY0402.078433_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.078433
Chromosome:chromosome 17
Location:6214988
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g742050 (1 of 18) IPR011051 - RmlC-like cupin domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCGAAGCCATCAGAAGCTGTGCAGCTG
Internal bar code:AAGCCGGGGCTCGGGGCTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:629
LEAP-Seq percent confirming:99.1603
LEAP-Seq n confirming:1417
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGAGCACGTCGATAAGC
Suggested primer 2:AAAGCCTGGTACGTGTGGAC