Insertion junction: LMJ.RY0402.078639_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.078639
Chromosome:chromosome 6
Location:8642204
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g309300 KSGA,RRM7,KSGA1 Dimethyl transferase for modification of 16S rRNA; (1 of 1) 2.1.1.182 - 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGATGTCGCGCAGGATGGTGTCGTCCATC
Internal bar code:TGAGAAGCTTTGAGTGGAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:245
LEAP-Seq percent confirming:77.7672
LEAP-Seq n confirming:815
LEAP-Seq n nonconfirming:233
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TATGTGTGATGCCGTGTGTG
Suggested primer 2:GATGGAGAAAGGGAAGGAGG