Insertion junction: LMJ.RY0402.078711_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.078711
Chromosome:chromosome 9
Location:1436995
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g398400 TRP5 Transient receptor potential ion channel protein; (1 of 46) PF00520 - Ion transport protein (Ion_trans) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGGCCTGCGTGCCGCCGGCGCGTGTGC
Internal bar code:ACGCGGTAGTGTCGGTGAGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:363
LEAP-Seq percent confirming:92.2708
LEAP-Seq n confirming:5384
LEAP-Seq n nonconfirming:451
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGCATTCTTAAGGGCTG
Suggested primer 2:GGTTCTTGAGCTTCACCAGC