Insertion junction: LMJ.RY0402.078853_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.078853
Chromosome:chromosome 1
Location:2952167
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g018050 NEF1 (1 of 1) PTHR35313//PTHR35313:SF1 - FAMILY NOT NAMED // NO EXINE FORMATION 1; NEF1-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGAGGCGCGGGCGGGGGCGGGGGTCGA
Internal bar code:GTCGGACCGCGAGCGCACGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:317
LEAP-Seq percent confirming:67.512
LEAP-Seq n confirming:2103
LEAP-Seq n nonconfirming:1012
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TAAAACGAGTCAGCATTGCG
Suggested primer 2:CTAAGCTGGCCTGTTCGTTC