Insertion junction: LMJ.RY0402.078858_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.078858
Chromosome:chromosome 1
Location:1054439
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g006150 EFG9,PRFC1, PRFC1,PRF3 (1 of 1) PTHR23115//PTHR23115:SF69 - TRANSLATION FACTOR // PEPTIDE CHAIN RELEASE FACTOR 3; Putative chloroplast translation peptide-chain release factor 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCTTATGTGGGCCCACACACCGTTTGGG
Internal bar code:CCGATCGGTTAGGGCCTGACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:53
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGTGTGTGTGTGTGTGT
Suggested primer 2:CATCCTCCCCTTCTTCCTTC