Insertion junction: LMJ.RY0402.078867_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.078867
Chromosome:chromosome 4
Location:2072063
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre04.g219150 (1 of 14) IPR006626//IPR011050 - Parallel beta-helix repeat // Pectin lyase fold/virulence factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCAGTTCATCGACGGCACTGTGCGCGA
Internal bar code:GGTCAGACGACTACCGGCTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:365
LEAP-Seq percent confirming:99.1778
LEAP-Seq n confirming:965
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTCACTTGACTGCTGCT
Suggested primer 2:TGTACATAGCATAAGCGGCG