Insertion junction: LMJ.RY0402.078932_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.078932
Chromosome:chromosome 7
Location:1471644
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g323550 PUS8 (1 of 2) 5.4.99.19 - 16S rRNA pseudouridine(516) synthase / 16S RNA Psi(516) synthase; RNA pseudouridine synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCGGGGCACGAGGTTTGGACTTCTGGG
Internal bar code:ATCTAATGTTGAGCTATTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:327
LEAP-Seq percent confirming:98.5714
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAAGTGAAGGCGTAGGCA
Suggested primer 2:GTGCGTGTGTGAGTTAGCGT