Insertion junction: LMJ.RY0402.079108_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.079108
Chromosome:chromosome 3
Location:2771339
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g161950 (1 of 26) IPR011990 - Tetratricopeptide-like helical domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGTACGGCACCCCCACCCCCCGCAGCCG
Internal bar code:TAATGATTGTGTGGCCGAGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:526
LEAP-Seq percent confirming:81.7901
LEAP-Seq n confirming:1060
LEAP-Seq n nonconfirming:236
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGGTGTCATGGTTGAGG
Suggested primer 2:TTCGAGTTTCGGCTGAGTTT