Insertion junction: LMJ.RY0402.079108_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.079108
Chromosome:chromosome 5
Location:1418385
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g244200 TMA1,COTH2 spore coat protein H; (1 of 3) PF08757 - CotH protein (CotH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGCACCCCTCAACACCGCCGGCCCCGG
Internal bar code:GGCTCAGTTCCTAAGTGTGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:533
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ATATAGTCGCGCCAGTTGCT
Suggested primer 2:TGTTACCGTATGGTTTGCGA