Insertion junction: LMJ.RY0402.079155_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.079155
Chromosome:chromosome 3
Location:4244594
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g174100 (1 of 1) IPR013122//IPR015928 - Polycystin cation channel, PKD1/PKD2 // Aconitase/3-isopropylmalate dehydratase, swivel 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGGCCACGCACGGCTGCGCACGGCCGC
Internal bar code:GCAGCTCGTGTTGGAGACTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1169
LEAP-Seq percent confirming:95.9124
LEAP-Seq n confirming:657
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGATGAACACTTGCACGC
Suggested primer 2:GAGCAGTAGGAGCAAATGGC