Insertion junction: LMJ.RY0402.079209_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.079209
Chromosome:chromosome 10
Location:3127350
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre10.g441800 (1 of 4) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGGCAAGGCGTGGCTGGCCCTGGCGCG
Internal bar code:GACTGCGTCGGCCATGTACTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:552
LEAP-Seq percent confirming:99.7748
LEAP-Seq n confirming:443
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTGATTCCTTGCTCTTGCCT
Suggested primer 2:TGCACAGCATTTCACTAGCC