Insertion junction: LMJ.RY0402.079317_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.079317
Chromosome:chromosome 8
Location:2511883
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g372000 BAF3,CGLD6,CGLD11 chloroplast ATPase CF1 assembly factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAATCTGGAATTCAGGCGCGGAATGGGGG
Internal bar code:AAACAAACCCTTCGATTTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:186
LEAP-Seq percent confirming:98.9813
LEAP-Seq n confirming:1166
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCAATGGGATTGGCAGT
Suggested primer 2:AAGGGGAGGTGTGTGAGATG