Insertion junction: LMJ.RY0402.079363_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.079363
Chromosome:chromosome 15
Location:806622
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre15.g639850 NCL6,OPR96 Nuclear Control of chloroplast Like 6, pseudogene; (1 of 45) IPR013584 - RAP domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCCAACGTTCTGAGCCCCATACCCGGC
Internal bar code:CACGGGGAGGTATTGCAGTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:672
LEAP-Seq percent confirming:84.6649
LEAP-Seq n confirming:1579
LEAP-Seq n nonconfirming:286
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTTTCGGTTGTAGAGG
Suggested primer 2:GATCCTGAGGTCCTTGTGGA