Insertion junction: LMJ.RY0402.079419_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.079419
Chromosome:chromosome 8
Location:2531779
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g372250 YDIF1,YDIF Putative soluble chloroplast ABCF protein, related to bacterial YdiF.; (1 of 1) PTHR19211//PTHR19211:SF48 - ATP-BINDING TRANSPORT PROTEIN-RELATED // ABC TRANSPORTER F FAMILY MEMBER 2-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCTCCACGTGCTCACGCGCCAACCAGA
Internal bar code:TGTATGGGCTCTGATCGGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:384
LEAP-Seq percent confirming:99.6162
LEAP-Seq n confirming:5451
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGAAGAAGTGAGCGGGTG
Suggested primer 2:TAGAGCGCAACGTAATGCAC