Insertion junction: LMJ.RY0402.079460_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.079460
Chromosome:chromosome 9
Location:901807
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g401300 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGAGAAACAGGTCCACGCAGGACAGAGA
Internal bar code:GTACGATCGGTGCTCATTTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:632
LEAP-Seq percent confirming:99.2919
LEAP-Seq n confirming:1262
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAGATGAGGGGTGTTACG
Suggested primer 2:ACCCCTGCAATCGTACACTC