Insertion junction: LMJ.RY0402.079478_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.079478
Chromosome:chromosome 3
Location:5438815
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g185150 (1 of 11) IPR023109 - Integrase/recombinase, N-terminal 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCATAACGAGCACCAAACAACATGCACTA
Internal bar code:AGGGTAGGTAGGTTCCGGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:592
LEAP-Seq percent confirming:98.5376
LEAP-Seq n confirming:1415
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGAGATCCAGGCTCTGAC
Suggested primer 2:AAGAAGGACAAGGTGAGCGA