Insertion junction: LMJ.RY0402.079555_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.079555
Chromosome:chromosome 7
Location:1456629
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g323350 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCACACCGCCGTTAATTAACCACAAGTA
Internal bar code:TTATCCCGGGACGGGTGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:426
LEAP-Seq percent confirming:98.5081
LEAP-Seq n confirming:4358
LEAP-Seq n nonconfirming:66
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACTACCTGCAGCGCCTAGAG
Suggested primer 2:AACCGCCTACACCTCATCAC