Insertion junction: LMJ.RY0402.079889_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.079889
Chromosome:chromosome 5
Location:1051458
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g246250 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTCCGGGTCAAGTTCTGCTGTACATGCG
Internal bar code:TTAGATTGATCATAATCGCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:0
LEAP-Seq percent confirming:79.3578
LEAP-Seq n confirming:173
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTCTGCTGTTTCACACG
Suggested primer 2:GGGAGCCCAAGGAGCTATAC