Insertion junction: LMJ.RY0402.079905_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.079905
Chromosome:chromosome 5
Location:1456208
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g244000 (1 of 1) IPR000253//IPR009836 - Forkhead-associated (FHA) domain // Protein of unknown function DUF1399 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTGCGGCCCGCCTACCTGGACTGCGCA
Internal bar code:CGAGGGGCAAACTCGGACTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:120
LEAP-Seq percent confirming:63.347
LEAP-Seq n confirming:617
LEAP-Seq n nonconfirming:357
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTATGTGCCACGCTGAGGTA
Suggested primer 2:GCGTACCTGTGTTTGGGAGT