Insertion junction: LMJ.RY0402.079909_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.079909
Chromosome:scaffold 35
Location:31511
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre35.g759447 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAAAGGCACATCAGCTAGTACGCGACGTC
Internal bar code:TTTACCCTTAGTGCAAGTACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:531
LEAP-Seq percent confirming:99.5215
LEAP-Seq n confirming:624
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACCTCTCCTTCCCCTAC
Suggested primer 2:CTGTTGCTGTTGCTGTTGCT