Insertion junction: LMJ.RY0402.080195_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.080195
Chromosome:chromosome 17
Location:5070080
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g734805 (1 of 8) PF00560 - Leucine Rich Repeat (LRR_1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCTCCCCTCCCACACACACTTGCGCCTC
Internal bar code:CGGCCCGCGTTATTAAGACGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:71
LEAP-Seq percent confirming:1.03306
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2395
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCTGACGCACCACTAAGA
Suggested primer 2:AAAACGTTCACCAATGGCTC