Insertion junction: LMJ.RY0402.080237_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.080237
Chromosome:chromosome 12
Location:8634486
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre12.g546900 (1 of 24) IPR006553 - Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGGCACTGCCGCTCAGCGCCGCGCACCT
Internal bar code:TGGCTCTAGGGGTAAAGGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:286
LEAP-Seq percent confirming:72.5541
LEAP-Seq n confirming:838
LEAP-Seq n nonconfirming:317
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATGCTATGGGGTCCTGA
Suggested primer 2:TCCACTCCATCTCATCTCCC