Insertion junction: LMJ.RY0402.080241_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.080241
Chromosome:chromosome 13
Location:2341947
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g579250 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCCCGGCTAGCAACTACCTACCAACCAC
Internal bar code:CCCGAGTGCGAGTATGGGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:379
LEAP-Seq percent confirming:95.1694
LEAP-Seq n confirming:1517
LEAP-Seq n nonconfirming:77
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGAGCGTGTGTGTGTGTG
Suggested primer 2:CATTGCGGATTACCTGGACT