Insertion junction: LMJ.RY0402.080268_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.080268
Chromosome:chromosome 9
Location:3369432
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g388726 (1 of 1) 3.1.3.32 - Polynucleotide 3'-phosphatase / 2'(3')-polynucleotidase 3'UTR|intron|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCGGGACTCGTACTTTGCAACAAGTTC
Internal bar code:AGGCGATAGGTCGCAGCACATT

Confirmation - LEAP-Seq

LEAP-Seq distance:465
LEAP-Seq percent confirming:97.9302
LEAP-Seq n confirming:1656
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAACTGCTGCCAAGAAGG
Suggested primer 2:GCTATGGCTAACGCCTCAAG