Insertion junction: LMJ.RY0402.080399_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.080399
Chromosome:chromosome 13
Location:2409787
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g579598 SSS3B,SSS3 (1 of 2) PTHR12526//PTHR12526:SF341 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED; Soluble starch synthase III 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTTACCACCACGACCCCACGACCCCCA
Internal bar code:ACATAACGTAATGTGAAGCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:923
LEAP-Seq percent confirming:93.4959
LEAP-Seq n confirming:460
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCATAATGTTTGCGTCTT
Suggested primer 2:CACCCATATATCCATTCGGC