Insertion junction: LMJ.RY0402.080491_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.080491
Chromosome:chromosome 12
Location:1824577
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g511950 (1 of 1) IPR003591//IPR013210 - Leucine-rich repeat, typical subtype // Leucine-rich repeat-containing N-terminal, plant-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCGCCAGGATGTGGCCGCAAAAGAGCGC
Internal bar code:TGGTAGAGACAAACCCTGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:476
LEAP-Seq percent confirming:99.6965
LEAP-Seq n confirming:657
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGATATTGGTGATGGAACGG
Suggested primer 2:TTACCATACCGGTGCACTCA