Insertion junction: LMJ.RY0402.080494_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.080494
Chromosome:chromosome 3
Location:4358823
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g175200 TOC75 Translocon at the outer envelope membrane of chloroplasts, 75 kDa subunit; (1 of 2) PTHR12815//PTHR12815:SF7 - SORTING AND ASSEMBLY MACHINERY SAM50 PROTEIN // OUTER ENVELOPE PROTEIN 80, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGATGTTCGGCCTTGCGGCATCATGGCATC
Internal bar code:TGGGCTGTTGCAACGACCCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:977
LEAP-Seq percent confirming:99.3428
LEAP-Seq n confirming:6802
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGACCCTGCTGCTTTCGT
Suggested primer 2:GGCGTACGACTACTTCTCGC