Insertion junction: LMJ.RY0402.080509_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.080509
Chromosome:chromosome 10
Location:979629
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g424775 CTP2,PCH1,PAA1 Copper transporting ATPase and Cu chaperone for CTP1; (1 of 1) PTHR24093:SF124 - COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC 3'UTR|intron|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCATTACAGTTGCAACCGTACGACCAGCT
Internal bar code:GCGTAGGGAAGGGGGGGACACA

Confirmation - LEAP-Seq

LEAP-Seq distance:673
LEAP-Seq percent confirming:96.5002
LEAP-Seq n confirming:2068
LEAP-Seq n nonconfirming:75
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACATACACACGCACCC
Suggested primer 2:GTGTGTCGTGAGGTTCCCTT