Insertion junction: LMJ.RY0402.080513_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.080513
Chromosome:chromosome 13
Location:3190619
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g585450 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGCCGGCGCCGGGGTGCCGGGGCGCTG
Internal bar code:GCAATTAGCAAAGGGGGGGGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:529
LEAP-Seq percent confirming:98.1308
LEAP-Seq n confirming:105
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GTACAGTTGCTGCTGCGTGT
Suggested primer 2:TGTGAAATCCTCCAAAAGCC