Insertion junction: LMJ.RY0402.080535_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.080535
Chromosome:chromosome 9
Location:199591
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g386743 (1 of 1) 2.1.1.305 - 8-demethyl-8-alpha-L-rhamnosyl tetracenomycin-C 2'-O-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGATGCGACCGCAATGGCTAAGGGGCAAG
Internal bar code:AACGGTTTGAATAGTGGAACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:370
LEAP-Seq percent confirming:97.9205
LEAP-Seq n confirming:1601
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTACGCCAATGACCCGTACT
Suggested primer 2:TGCACCCTACGGGACTTTAC