Insertion junction: LMJ.RY0402.080552_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.080552
Chromosome:chromosome 3
Location:5375882
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g184500 (1 of 2) PTHR33925:SF3 - PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGAACGCCTCGCCCATCGCCGCCTCCGC
Internal bar code:GGAACGCGCATTACGCCGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:891
LEAP-Seq percent confirming:99.4408
LEAP-Seq n confirming:2134
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATCGAAGTCCTCAACTG
Suggested primer 2:TAAGTGGTGAGCTTCATGCG